2020 - UMR Silva

[hal-02434220] TRY plant trait database – enhanced coverage and open access

Plant traits-the morphological, anatomical, physiological, biochemical and phenological characteristics of plants-determine how plants respond to environmental factors, affect other trophic levels, and influence ecosystem properties and their benefits and detriments to people. Plant trait data thus represent the basis for a vast area of research spanning from evolutionary biology, community and functional ecology, to biodiversity conservation, ecosystem and landscape management, restoration , biogeography and earth system modelling. Since its foundation in 2007, the TRY database of plant traits has grown continuously. It now provides unprecedented data coverage under an open access data policy and is the main plant trait database used by the research community worldwide. Increasingly, the TRY database also supports new frontiers of trait-based plant research, including the identification of data gaps and the subsequent mobilization or measurement of new data. To support this development, in this article we evaluate the extent of the trait data compiled in TRY and analyse emerging patterns of data coverage and representativeness. Best species coverage is achieved for categorical traits-almost complete coverage for 'plant growth form'. However, most traits relevant for ecology and vegetation modelling are characterized by continuous intraspecific variation and trait-environmental relationships. These traits have to be measured on individual plants in their respective environment. Despite unprecedented data coverage, we observe a humbling lack of completeness and representativeness of these continuous traits in many aspects. We, therefore, conclude that reducing data gaps and biases in the TRY database remains a key challenge and requires a coordinated approach to data mobilization and trait measurements. This can only be achieved in collaboration with other initiatives.

ano.nymous@ccsd.cnrs.fr.invalid (Jens Kattge) 09 Nov 2020

https://amu.hal.science/hal-02434220v1

[hal-03051411] Energy, water and carbon exchanges in managed forest ecosystems: description, sensitivity analysis and evaluation of the INRAE GO+ model, version 3.0

The mechanistic model GO+ describes the functioning and growth of managed forests based upon biophysical and biogeochemical processes. The biophysical and biogeochemical processes included are modelled using standard formulations of radiative transfer, convective heat exchange, evapotranspiration, photosynthesis, respiration, plant phenology, growth and mortality, biomass nutrient content, and soil carbon dynamics. The forest ecosystem is modelled as three layers, namely the tree overstorey, understorey and soil. The vegetation layers include stems, branches and foliage and are partitioned dynamically between sunlit and shaded fractions. The soil carbon submodel is an adaption of the Roth-C model to simulate the impact of forest operations. The model runs at an hourly time step. It represents a forest stand covering typically 1 ha and can be straightforwardly upscaled across gridded data at regional, country or continental levels. GO+ accounts for both the immediate and long-term impacts of forest operations on energy, water and carbon exchanges within the soil–vegetation–atmosphere continuum. It includes exhaustive and versatile descriptions of management operations (soil preparation, regeneration, vegetation control, selective thinning, clear-cutting, coppicing, etc.), thus permitting the effects of a wide variety of forest management strategies to be estimated: from close to nature to intensive. This paper examines the sensitivity of the model to its main parameters and estimates how errors in parameter values are propagated into the predicted values of its main output variables.The sensitivity analysis demonstrates an interaction between the sensitivity of variables, with the climate and soil hydraulic properties being dominant under dry conditions but the leaf biochemical properties being most influential with wet soil. The sensitivity profile of the model changes from short to long timescales due to the cumulative effects of the fluxes of carbon, energy and water on the stand growth and canopy structure. Apart from a few specific cases, the model simulations are close to the values of the observations of atmospheric exchanges, tree growth, and soil carbon and water stock changes monitored over Douglas fir, European beech and pine forests of different ages. We also illustrate the capacity of the GO+ model to simulate the provision of key ecosystem services, such as the long-term storage of carbon in biomass and soil under various management and climate scenarios.

ano.nymous@ccsd.cnrs.fr.invalid (Virginie Moreaux) 10 Dec 2020

https://hal.inrae.fr/hal-03051411v1

[hal-02650649] Long-term thermal sensitivity of Earth’s tropical forests

The sensitivity of tropical forest carbon to climate is a key uncertainty in predicting global climate change. Although short-term drying and warming are known to affect forests, it is unknown if such effects translate into long-term responses. Here, we analyze 590 permanent plots measured across the tropics to derive the equilibrium climate controls on forest carbon. Maximum temperature is the most important predictor of aboveground biomass (−9.1 megagrams of carbon per hectare per degree Celsius), primarily by reducing woody productivity, and has a greater impact per °C in the hottest forests (>32.2°C). Our results nevertheless reveal greater thermal resilience than observations of short-term variation imply. To realize the long-term climate adaptation potential of tropical forests requires both protecting them and stabilizing Earth’s climate.

ano.nymous@ccsd.cnrs.fr.invalid (Martin J P Sullivan) 17 Aug 2024

https://hal.umontpellier.fr/hal-02650649v1

[hal-03043585] Traits controlling shade tolerance in tropical montane trees

Tropical canopies are complex, with multiple canopy layers and pronounced gap dynamics contributing to their high species diversity and productivity. An important reason for this complexity is the large variation in shade tolerance among di erent tree species. At present, we lack a clear understanding of which plant traits control this variation, e.g., regarding the relative contributions of whole-plant versus leaf traits or structural versus physiological traits. We investigated a broad range of traits in six tropical montane rainforest tree species with di erent degrees of shade tolerance, grown under three di erent radiation regimes (under the open sky or beneath sparse or dense canopies). The two distinct shade-tolerant species had higher fractional biomass in leaves and branches while shade-intolerant species invested more into stems, and these di erences were greater under low radiation. Leaf respiration and photosynthetic light compensation point did not vary with species shade tolerance, regardless of radiation regime. Leaf temperatures in open plots were markedly higher in shade-tolerant species due to their low transpiration rates and large leaf sizes. Our results suggest that interspeci c variation in shade tolerance of tropical montane trees is controlled by species di erences in whole-plant biomass allocation strategy rather than by di erence in physiological leaf traits determining leaf carbon balance at low radiation.

ano.nymous@ccsd.cnrs.fr.invalid (Elisée Bahati Ntawuhiganayo) 07 Dec 2020

https://hal.science/hal-03043585v1

[hal-03207504] Altered energy partitioning across terrestrial ecosystems in the European drought year 2018

Drought and heat events, such as the 2018 European drought, interact with the exchange of energy between the land surface and the atmosphere, potentially affecting albedo, sensible and latent heat fluxes, as well as CO 2 exchange. Each of these quantities may aggravate or mitigate the drought, heat, their side effects on productivity, water scarcity and global warming. We used measurements of 56 eddy covariance sites across Europe to examine the response of fluxes to extreme drought prevailing most of the year 2018 and how the response differed across various ecosystem types (forests, grasslands, croplands and peatlands). Each component of the surface radiation and energy balance observed in 2018 was compared to available data per site during a reference period 2004–2017. Based on anomalies in precipitation and reference evapotranspiration, we classified 46 sites as drought affected. These received on average 9% more solar radiation and released 32% more sensible heat to the atmosphere compared to the mean of the reference period. In general, drought decreased net CO 2 uptake by 17.8%, but did not significantly change net evapotranspiration. The response of these fluxes differed characteristically between ecosystems; in particular, the general increase in the evaporative index was strongest in peatlands and weakest in croplands. This article is part of the theme issue ‘Impacts of the 2018 severe drought and heatwave in Europe: from site to continental scale’.

ano.nymous@ccsd.cnrs.fr.invalid (Alexander Graf) 25 Apr 2021

https://hal.inrae.fr/hal-03207504v1

[hal-02948828] Microgeographic local adaptation and ecotype distributions: The role of selective processes on early life‐history traits in sympatric, ecologically divergent Symphonia populations

Trees are characterized by the large number of seeds they produce. Although most of those seeds will never germinate, plenty will. Of those which germinate, many die young, and eventually, only a minute fraction will grow to adult stage and reproduce. Is this just a random process? Do variations in germination and survival at very young stages rely on variations in adaptations to microgeographic heterogeneity? and do these processes matter at all in determining tree species distribution and abundance?We have studied these questions with the Neotropical Symphonia tree species. In the Guiana shield, Symphonia are represented by at least two sympatric taxa or ecotypes, Symphonia globulifera found almost exclusively in bottomlands, and a yet undescribed more generalist taxon/ecotype, Symphonia sp1. A reciprocal transplantation experiment (510 seeds, 16 conditions) was set up and followed over the course of 6 years to evaluate the survival and performance of individuals from different ecotypes and provenances.Germination, survival, growth, and herbivory showed signs of local adaptation, with some combinations of ecotypes and provenances growing faster and surviving better in their own habitat or provenance region. S. globulifera was strongly penalized when planted outside its home habitat but showed the fastest growth rates when planted in its home habitat, suggesting it is a specialist of a high‐risk high‐gain strategy. Conversely, S. sp1 behaved as a generalist, performing well in a variety of environments.The differential performance of seeds and seedlings in the different habitats matches the known distribution of both ecotypes, indicating that environmental filtering at the very early stages can be a key determinant of tree species distributions, even at the microgeographic level and among very closely related taxa. Furthermore, such differential performance also contributes to explain, in part, the maintenance of the different Symphonia ecotypes living in intimate sympatry despite occasional gene flow.

ano.nymous@ccsd.cnrs.fr.invalid (Niklas Tysklind) 30 Sep 2020

https://hal.science/hal-02948828v1

[hal-02948753] The global abundance of tree palms

Aim Palms are an iconic, diverse and often abundant component of tropical ecosystems that provide many ecosystem services. Being monocots, tree palms are evolutionarily, morphologically and physiologically distinct from other trees, and these differences have important consequences for ecosystem services (e.g., carbon sequestration and storage) and in terms of responses to climate change. We quantified global patterns of tree palm relative abundance to help improve understanding of tropical forests and reduce uncertainty about these ecosystems under climate change. Location Tropical and subtropical moist forests. Time period Current. Major taxa studied Palms (Arecaceae). Methods We assembled a pantropical dataset of 2,548 forest plots (covering 1,191 ha) and quantified tree palm (i.e., >= 10 cm diameter at breast height) abundance relative to co-occurring non-palm trees. We compared the relative abundance of tree palms across biogeographical realms and tested for associations with palaeoclimate stability, current climate, edaphic conditions and metrics of forest structure. Results On average, the relative abundance of tree palms was more than five times larger between Neotropical locations and other biogeographical realms. Tree palms were absent in most locations outside the Neotropics but present in >80% of Neotropical locations. The relative abundance of tree palms was more strongly associated with local conditions (e.g., higher mean annual precipitation, lower soil fertility, shallower water table and lower plot mean wood density) than metrics of long-term climate stability. Life-form diversity also influenced the patterns; palm assemblages outside the Neotropics comprise many non-tree (e.g., climbing) palms. Finally, we show that tree palms can influence estimates of above-ground biomass, but the magnitude and direction of the effect require additional work. Conclusions Tree palms are not only quintessentially tropical, but they are also overwhelmingly Neotropical. Future work to understand the contributions of tree palms to biomass estimates and carbon cycling will be particularly crucial in Neotropical forests.

ano.nymous@ccsd.cnrs.fr.invalid (Robert Muscarella) 09 Nov 2020

https://hal.inrae.fr/hal-02948753v1

[hal-02544285] La croissance des forêts et les changements environnementaux

Les forêts de l’hémisphère nord sont plus productives qu’il y a plusieurs décennies. Telle est la tendance observée et quantifiée dans différentes études menées depuis les années 1970 et qui mettent en cause plusieurs facteurs : les modifications des régimes pluviothermiques, les dépôts azotés et l’augmentation de la concentration atmosphérique en dioxyde de carbone. À partir de données de l’inventaire forestier national, les auteurs de cet article se sont penchéssur l’évolution des forêts françaises. Leurs résultats à des échelles plus fines mettent en évidence des variations extrêmes (négative et positive) liées aux espèces et au contexte environnemental local qu’il conviendrait de suivre en « temps réel » compte tenu des grandes incertitudes futures liées au climat.

ano.nymous@ccsd.cnrs.fr.invalid (François F. Lebourgeois) 21 Apr 2020

https://hal.science/hal-02544285v1

[hal-03317972] Ancient forest statistics provide centennial perspective over the status and dynamics of forest area in France

Context: The history of European forest dynamic remains fragmental. In France, the Daubrée statistics (1908) and agricultural statistics (1892, 1929) formed fundamental material to fill this gap. Aims: Release, test, and summarize the digitalized dataset. Analyze long-term forest changes in forest area, composition, and structure. Methods: Primary data on forest area across NUTS-3 geographic units, split by forest management and ownership categories and dominating tree species (Daubrée), were digitized and cross-compared. Centennial changes in forest attributes were assessed from modern forest inventory data. Results: Cross-comparison revealed: (1) strong temporal consistency in forest changes over time, (2) systematic and interpretable biases in ownership/management categories between Daubrée and agricultural statistics. Strong shift from coppices to high forests, increased prevalence of private ownership, and constant proportion of broadleaf- and conifer-dominated forests were highlighted, with increased tree species diversity at country scale. Conclusion: Ancient statistics are shown to play a major role in retrospective land-use and forest policy analysis.

ano.nymous@ccsd.cnrs.fr.invalid (Timothée Audinot) 09 Aug 2021

https://hal.science/hal-03317972v1

[hal-02931277] A Machine-Learning Approach for Classifying Defects on Tree Trunks using Terrestrial LiDAR

Three-dimensional data are increasingly prevalent in forestry thanks to terrestrial LiDAR. This work assesses the feasibility for an automated recognition of the type of local defects present on the bark surface. These sin-gularities are frequently external markers of inner defects affecting wood quality, and their type, size, and frequency are major components of grading rules. The proposed approach assigns previously detected abnormalities in the bark roughness to one of the defect types: branches, branch scars, epi-cormic shoots, burls, and smaller defects. Our machine learning approach is based on random forests using potential defects shape descriptors, including Hu invariant moments, dimensions, and species. The results of our experiments involving different French commercial species, oak, beech, fir, and pine showed that most defects were well classified with an average F 1 score of 0.86.

ano.nymous@ccsd.cnrs.fr.invalid (Van-Tho Nguyen) 05 Sep 2020

https://hal.science/hal-02931277v1

[hal-03085655] Unprecedented pluri-decennial increase in the growing stock of French forests is persistent and dominated by private broadleaved forests

& Key message French forests exhibit the fastest relative changes across Europe. Growing stock increases faster than area, and is greatest in low-stocked private broadleaved forests. Past areal increases and current GS levels show positive effects on GS expansion, with GS increases hence expected to persist. & Context Strong increases in growing stocks (GS) of European forests for decades remain poorly understood and of unknown duration. French forests showing the greatest relative changes across Europe form the investigated case study. & Aims The magnitudes of net area, GS, and GS density (GSD) changes were evaluated across forest categories reflecting forest policy and land-use drivers. The roles of forest areal changes, GS and GSD levels on GS changes were investigated. & Methods National Forest Inventory data were used to produce time series of area, GS and GSD across forest categories over 1976–2014, and exploratory causal models of GS changes. & Results GS (+ 57%) increased three times faster than area, highlighting an advanced stage in the forest transition. Low-stocked private forests exhibited strong changes in GS/GSD, greatest in private broadleaved forests, stressing the contribution of returning forests on abandoned lands. Regression models demonstrated positive effects of both past areal increases and current GS, on GS expansion. & Conclusion Aerial C-sink in French forests is expected to persist in future decades.

ano.nymous@ccsd.cnrs.fr.invalid (Jean-Daniel Bontemps) 21 Dec 2020

https://hal.science/hal-03085655v1

[hal-03778635] The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data

The FLUXNET2015 dataset provides ecosystem-scale data on CO 2 , water, and energy exchange between the biosphere and the atmosphere, and other meteorological and biological measurements, from 212 sites around the globe (over 1500 site-years, up to and including year 2014). These sites, independently managed and operated, voluntarily contributed their data to create global datasets. Data were quality controlled and processed using uniform methods, to improve consistency and intercomparability across sites. The dataset is already being used in a number of applications, including ecophysiology studies, remote sensing studies, and development of ecosystem and Earth system models. FLUXNET2015 includes derived-data products, such as gap-filled time series, ecosystem respiration and photosynthetic uptake estimates, estimation of uncertainties, and metadata about the measurements, presented for the first time in this paper. In addition, 206 of these sites are for the first time distributed under a Creative Commons (CC-BY 4.0) license. This paper details this enhanced dataset and the processing methods, now made available as open-source codes, making the dataset more accessible, transparent, and reproducible.

ano.nymous@ccsd.cnrs.fr.invalid (Gilberto Pastorello) 16 Sep 2022

https://hal.science/hal-03778635v1

[hal-02995533] Ecosystem transpiration and evaporation: Insights from three water flux partitioning methods across FLUXNET sites

We apply and compare three widely applicable methods for estimating ecosystem transpiration (T) from eddy covariance (EC) data across 251 FLUXNET sites globally. All three methods are based on the coupled water and carbon relationship, but they differ in assumptions and parameterizations. Intercomparison of the three daily T estimates shows high correlation among methods (R between .89 and .94), but a spread in magnitudes of T/ET (evapotranspiration) from 45% to 77%. When compared at six sites with concurrent EC and sap flow measurements, all three EC‐based T estimates show higher correlation to sap flow‐based T than EC‐based ET. The partitioning methods show expected tendencies of T/ET increasing with dryness (vapor pressure deficit and days since rain) and with leaf area index (LAI). Analysis of 140 sites with high‐quality estimates for at least two continuous years shows that T/ET variability was 1.6 times higher across sites than across years. Spatial variability of T/ET was primarily driven by vegetation and soil characteristics (e.g., crop or grass designation, minimum annual LAI, soil coarse fragment volume) rather than climatic variables such as mean/standard deviation of temperature or precipitation. Overall, T and T/ET patterns are plausible and qualitatively consistent among the different water flux partitioning methods implying a significant advance made for estimating and understanding T globally, while the magnitudes remain uncertain. Our results represent the first extensive EC data‐based estimates of ecosystem T permitting a data‐driven perspective on the role of plants’ water use for global water and carbon cycling in a changing climate.

ano.nymous@ccsd.cnrs.fr.invalid (Jacob Nelson) 07 Jun 2022

https://hal.univ-lorraine.fr/hal-02995533v1

[hal-02541780] Carbon-nitrogen interactions in European forests and semi-natural vegetation - Part 1: Fluxes and budgets of carbon, nitrogen and greenhouse gases from ecosystem monitoring and modelling

The impact of atmospheric reactive nitrogen (Nr) deposition on carbon (C) sequestration in soils and biomass of unfertilized, natural, semi-natural and forest ecosystems has been much debated. Many previous results of this dC∕dN response were based on changes in carbon stocks from periodical soil and ecosystem inventories, associated with estimates of Nr deposition obtained from large-scale chemical transport models. This study and a companion paper (Flechard et al., 2020) strive to reduce uncertainties of N effects on C sequestration by linking multi-annual gross and net ecosystem productivity estimates from 40 eddy covariance flux towers across Europe to local measurement-based estimates of dry and wet Nr deposition from a dedicated collocated monitoring network. To identify possible ecological drivers and processes affecting the interplay between C and Nr inputs and losses, these data were also combined with in situ flux measurements of NO, N2O and CH4 fluxes; soil NO−3 leaching sampling; and results of soil incubation experiments for N and greenhouse gas (GHG) emissions, as well as surveys of available data from online databases and from the literature, together with forest ecosystem (BASFOR) modelling.

ano.nymous@ccsd.cnrs.fr.invalid (Chris Flechard) 15 Jul 2020

https://hal.inrae.fr/hal-02541780v1

[hal-02948747] Contrasting patterns of tree species mixture effects on wood δ13C along an environmental gradient

Establishing mixed-species stands is frequently proposed as a strategy to adapt forests to the increasing risk of water scarcity, yet contrasted results have been reported regarding mixing effects on tree drought exposure. To investigate the drivers behind the spatial and temporal variation in water-related mixing effects, we analysed the delta C-13 variation in 22-year tree ring chronologies for beech and pine trees sampled from 17 pure and mixed pine-beech stands across a large gradient of environmental conditions throughout Europe. In the pure stands, average delta C-13 values were lower for beech (-27.9 parts per thousand to -22.2 parts per thousand) than for pine (-26.0 parts per thousand to -21.1 parts per thousand), irrespective of site conditions. Decreasing SPEI values (calculated over June to September) were associated with an increase in delta C-13 for both species, but their effect was influenced by stand basal area for pine and site water availability for beech. Mixing did not change the temporal constancy of delta C-13 nor the tree reaction to a drought event, for any of the species. While the mixing effect (Delta delta C-13 = delta C-13 pure stands - delta C-13 mixed stands) was on average positive for beech and non-significant for pine across the whole gradient, this effect strongly differed between sites. For both species, mixing was not significant at extremely dry sites and positive at dry sites; on moderately wet sites, mixing was positive for beech and negative for pine; at sites with permanent water supply, no general patterns emerge for any of the species. The pattern of mixing effect along the gradient of water availability was not linear but showed threshold points, highlighting the need to investigate such relation for other combinations of tree species.

ano.nymous@ccsd.cnrs.fr.invalid (G. de Streel) 25 Oct 2023

https://hal.inrae.fr/hal-02948747v1

[hal-03040768] Water potential control of turgor‐driven tracheid enlargement in Scots pine at its xeric distribution edge

The extent to which water availability can be used to predict the enlargement and final dimensions of xylem conduits remains an open issue. We reconstructed the time course of tracheid enlargement in Pinus sylvestris trees in central Spain by repeated measurements of tracheid diameter on microcores sampled weekly during a 2 yr period. We analyzed the role of water availability in these dynamics empirically through time-series correlation analysis and mechanistically by building a model that simulates daily tracheid enlargement rate and duration based on Lockhart's equation and water potential as the sole input. Tracheid enlargement followed a sigmoid-like time course, which varied intra- and interannually. Our empirical analysis showed that final tracheid diameter was strongly related to water availability during tracheid enlargement. The mechanistic model was calibrated and successfully validated (R-2 = 0.92) against the observed tracheid enlargement time course. The model was also able to reproduce the seasonal variations of tracheid enlargement rate, duration and final diameter (R-2 = 0.84-0.99). Our results support the hypothesis that tracheid enlargement and final dimensions can be modeled based on the direct effect of water potential on turgor-driven cell expansion. We argue that such a mechanism is consistent with other reported patterns of tracheid dimension variation.

ano.nymous@ccsd.cnrs.fr.invalid (Antoine Cabon) 17 Jan 2025

https://hal.inrae.fr/hal-03040768v1

[hal-03273208] La crise des scolytes (Ips typographus) ravageurs de l’Épicéa commun (Picea abies) vue de l’intérieur Retours sur une enquête qualitative auprès d’acteurs du nord-est de la France et sa zone transfrontalière (Allemagne, Belgique) réalisée fin 2019 – début 2020

L’épidémie de scolytes (essentiellement Ips typographus) qui sévit depuis 2018 dans les pessières d’Europe a conduit à une situation de crise dans la filière forêt-bois. Cette étude a pour objectif de caractériser et de comprendre la façon dont les acteurs font face à ces événements afin d’en tirer des enseignements pour de futures crises. Une enquête qualitative a été conduite entre novembre 2019 et janvier 2020 auprès de 41 acteurs de la filière forêt-bois dans les régions Grand Est, Bourgogne-Franche-Comté, Bade-Wurtemberg et Wallonie. Elle a mis en évidence des freins et points de blocage concernant la gestion de cette crise tels qu’un manque d’anticipation, des difficultés techniques et financières pour mener les actions opérationnelles nécessaires, une communication lente au niveau national, ou des difficultés administratives pour obtenir des aides financières. En revanche, la crise semble avoir conduit à un renforcement des collaborations au sein de la filière, notamment grâce au travail des structures interprofessionnelles.

ano.nymous@ccsd.cnrs.fr.invalid (Samuel Sénécal) 29 Jun 2021

https://agroparistech.hal.science/hal-03273208v1

[hal-02934348] Sacrificing growth and maintaining a dynamic carbohydrate storage are key processes for promoting beech survival under prolonged drought conditions

Key message In case of a prolonged drought, the stored carbohydrates in trees were remobilized to fuel survival functions until their nearly depletion at death stage. Abstract Dynamic global vegetation models project forest tree mortality in response to the recurrent severe droughts likely in the future. However, these models should better take into account the physiological processes involved in tree mortality. Faced with severe drought, the Fagus sylvatica L. tree strongly limits its cambial growth. This suggests that readjustments in carbon (C) allocation among sink functions are taking place in response to the lack of water and this could allow tree's survival. For 3 years, we induced a water shortage on 8-year-old beech trees in a rain exclusion system. During this period, we analysed the consequences of severe drought on survival rate, growth, and non-structural carbohydrate (NSC) dynamics in the aboveground and belowground compartments of control, water-stressed living, and dead trees. The survival rate after 3 years of drought was 87%, while primary and secondary growth was strongly reduced. The first 2 years, NSC concentrations increased in all tree compartments (stem, branches, and roots) in response to drought. However, during the third year, starch dropped markedly in water-stressed trees, while soluble sugar concentrations remained similar to control trees. All the compartments in dead trees were virtually empty of starch and soluble sugars. Maintaining an active C storage function at the expense of growth was certainly key to F. sylvatica survival under prolonged extreme drought conditions. Process-based models predicting mortality should better take into account C storage and remobilization processes in forest trees.

ano.nymous@ccsd.cnrs.fr.invalid (Pierre-Antoine Chuste) 09 Sep 2020

https://hal.science/hal-02934348v1

[hal-03197983] Year-to-year crown condition poorly contributes to ring width variations of beech trees in French ICP level I network

Since the 1980-90's episodes of decline in Central European Forests, forest condition has been surveyed thanks to the trans-national network the International Co-operative Programme on Assessment and Monitoring of Air Pollution Effects on Forests (ICP Forests). It has been traditionally accepted that leaf loss is directly related to impairment of physiological condition of the tree. A few studies tried to correlate crown condition and growth trends while others concentrated on linking annual growth with crown observation at one date clustered into fertility classes. However, none focussed on the high frequency synchronism between leaf loss from annual network observations and annual radial growth issued from dendrochronology. Therefore, we jointly studied annual leaf loss observations and tree-ring width measurements on 715 common beech (Fagus sylvatica L.) trees distributed in the French part of the ICP monitoring network. Detrended inter-annual variations of leaf loss and tree-ring width index were used as response variables in the machine-learning algorithm Random Forest to investigate a common response to abiotic (current and lagged) and biotic hazards, to test the extent to which leaf loss helped to predict inter-annual variations in radial growth. Using Random Forest was effective to identify a common sensitivity to soil water deficit at different time lags. Previous-year climatic variables tended to control leaf loss while radial growth was more sensitive to current-year soil water deficit. Late frost damages were observed on crown condition in mountainous regions but no impact was detected on radial growth. Few significant biotic damages were observed on growth or leaf loss. Leaf loss series did not show a clear common signal among trees from a plot as did radial growth and captured fewer pointer years. Radial growth index did not fall below normal until a 20% leaf loss was reached. However, this threshold is driven by a few extreme leaf loss events. As shown by our joint analysis of leaf loss and radial growth pointer years, no relationship occurred in cases of slight or moderate defoliation. Crown condition is a poorer descriptor of tree vitality than radial growth.

ano.nymous@ccsd.cnrs.fr.invalid (Clara Tallieu) 22 Aug 2022

https://hal.inrae.fr/hal-03197983v1

[hal-03046910] Do tree rings record changes in soil fertility? Results from a Quercus petraea fertilization trial

Through the variations in their dimension, density, anatomy or isotopes composition, tree rings have provided invaluable proxies to evaluate past changes in the environment. Whereas long-term records of changes in soil fertility are particularly desired for forest ecosystem studies, the use of the chemical composition of tree rings as potential marker is still controversial. Dendrochemistry has sometimes been considered as a promising approach to study past changes in soil chemistry, whereas some authors stated that element translocations in the wood preclude any possibility of reliable retrospective monitoring. Here, we aimed at testing whether the wood elemental content of fertilized oaks (Quercus petraea) differed from control trees >30 years after a NPKCaMg fertilization and, if so, if the date of fertilization could be retrieved from the ring analysis. The contents in N, Mg, P, K, Ca and Mn were measured for each of the 43 sampled trees and in every ring of the 58-year long chronology with a non-destructive method coupling a Wavelength Dispersive Spectroscope (WDS) with a Scanning Electron Microscope (SEM).The results showed significantly higher contents in Ca and lower contents in Mn in fertilized compared to control trees. However, there was no difference in elemental content between the rings of the fertilized trees built in the 20 years before and those built after fertilization. Thus, whereas the effect of fertilization on increasing ring width was dramatic, immediate and relatively short-lasting, the elemental composition of the entire ring sequence was impacted, precluding the dating of the event. These results question the possibility to reconstruct long-term changes in soil fertility based on dendrochemistry.

ano.nymous@ccsd.cnrs.fr.invalid (Maxime Durand) 07 Mar 2022

https://hal.inrae.fr/hal-03046910v1

[hal-03231138] Salt accumulation and effects within foliage of Tilia × vulgaris trees from the street greenery of Riga, Latvia

Green infrastructures within sprawling cities provide essential ecosystem services, increasingly undermined by environmental stress. The main objective in this study was to relate the allocation patterns of NaCl contaminants to injury within foliage of lime trees mechanistically and distinguish between the effects of salt and other environmental stressors. Using field material representative of salt contamination levels in the street greenery of Riga, Latvia, the contribution of salt contaminants to structural and ultrastructural injury was analyzed, combining different microscopy techniques. On severely salt-polluted and dystrophic soils, the foliage of street lime trees showed foliar concentrations of Na/Cl up to 13,600/16,750 mg kg−1 but a still balanced nutrient content. The salt contaminants were allocated to all leaf blade tissues and accumulated in priority within mesophyll vacuoles, changing the vacuolar ionic composition at the expense of especially K and Ca. The size of mesophyll cells and vacuoles was increased as a function of NaCl concentration, suggesting impeded transpiration stream. In parallel, the cytoplasm showed degenerative changes, suggesting indirect stress effects. Hence, the lime trees in Riga showed tolerance to the dystrophic environmental conditions enhanced by salt pollution but their leaf physiology appeared directly impacted by the accumulation of contaminants within foliage.

ano.nymous@ccsd.cnrs.fr.invalid (Gunta Cekstere) 25 Oct 2023

https://hal.science/hal-03231138v1

[hal-03209300] Reply to Elmendorf and Ettinger: Photoperiod plays a dominant and irreplaceable role in triggering secondary growth resumption

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ano.nymous@ccsd.cnrs.fr.invalid (Jian-Guo Huang) 27 Apr 2021

https://hal.inrae.fr/hal-03209300v1

[hal-03209287] Photoperiod and temperature as dominant environmental drivers triggering secondary growth resumption in Northern Hemisphere conifers

Wood formation consumes around 15% of the anthropogenic CO 2 emissions per year and plays a critical role in long-term sequestration of carbon on Earth. However, the exogenous factors driving wood formation onset and the underlying cellular mechanisms are still poorly understood and quantified, and this hampers an effective assessment of terrestrial forest productivity and carbon budget under global warming. Here, we used an extensive collection of unique datasets of weekly xylem tissue formation (wood formation) from 21 coniferous species across the Northern Hemisphere (latitudes 23 to 67°N) to present a quantitative demonstration that the onset of wood formation in Northern Hemisphere conifers is primarily driven by photoperiod and mean annual temperature (MAT), and only secondarily by spring forcing, winter chilling, and moisture availability. Photoperiod interacts with MAT and plays the dominant role in regulating the onset of secondary meristem growth, contrary to its as-yet-unquantified role in affecting the springtime phenology of primary meristems. The unique relationships between exogenous factors and wood formation could help to predict how forest ecosystems respond and adapt to climate warming and could provide a better understanding of the feedback occurring between vegetation and climate that is mediated by phenology. Our study quantifies the role of major environmental drivers for incorporation into state-of-the-art Earth system models (ESMs), thereby providing an improved assessment of long-term and high-resolution observations of biogeochemical cycles across terrestrial biomes.

ano.nymous@ccsd.cnrs.fr.invalid (Jian-Guo Huang) 27 Apr 2021

https://hal.inrae.fr/hal-03209287v1

[hal-02975249] Early effects of temperate agroforestry practices on soil organic matter and microbial enzyme activity

Aims: A field experiment was conducted to evaluate the effects of alley cropping systems on microbial activity and soil organic matter (SOM) pools. We hypothesized that enzyme activity and labile pools of SOM are early and sensitive indicators of changes induced by tree introduction in the cropping systems. Methods: Poplar-alfalfa and alder-gramineous (cereal or ryegrass) associations and their respective control systems (alfalfa and gramineous) were compared in terms of soil carbon (C), nitrogen (N) and water contents, SOM labile pools, NIRS-MIRS spectra and microbial enzyme activity in the topsoil (0–15 cm) for 4 years after tree planting. Results: After 1 year, tree introduction induced a decrease in soil water content, microbial biomass N and some enzyme activities under alfalfa system. After 4 years, tree introduction resulted in higher soil water contents in both systems (alfalfa and gramineous); higher microbial biomass N and lower C:N in alfalfa-poplar plots compared to control plots. MIRS-NIRS analyses showed a greatest differentiation in SOM quality between alfalfa-based systems. Conclusions: The effects of temperate agroforestry systems on SOC in the topsoil are relatively weak in the first years after tree introduction. Observed effects were more pronounced in the alfalfa-poplar system, probably due to higher tree growth. Further studies will provide insights into the longer-term effects of these systems on soil functioning.

ano.nymous@ccsd.cnrs.fr.invalid (Hugues Clivot) 26 Apr 2022

https://hal.science/hal-02975249v1

[hal-03037468] Windstorm‐induced canopy openings accelerate temperate forest adaptation to global warming

Aim Climate change is known to be a driver of changes in forest plant communities and to modify disturbance regimes. We investigated whether forest gaps favoured vegetation adaptation to warmer climates by accelerating the shift of plant communities to a warmer-adapted composition independently of canopy closure linked to natural forest dynamics. Location Temperate and mountainous forests of France. Time period 2002-2018. Major taxa studied Vascular plants. Methods Using floristic surveys conducted in 2002 and 2018 in 139 permanent plots set up in unmanaged forest gaps created by windstorms in 1999, we assessed the plant communities' changes in context of global warming. We also compared gap communities to closed communities inventoried in undisturbed forest. A community temperature index (CTI) and a community light index (CLI) were computed for each floristic survey with species temperature optima and Ellenberg light indicator values, respectively. Results CTI increased significantly in the gaps over the 16 years by 0.11 degrees C/decade on average. During the same period, the CLI decreased, indicating that community thermophilization was not the direct result of an increase in solar radiation linked to gap creation. Models showed that, after canopy recovery, thermophilization was stronger in mountains (+0.54 degrees C) than lowland sites (+0.12 degrees C) compared to undisturbed forests. The difference between former gaps and undisturbed forests resulted from the colonization of warm adapted species and the decline of cold adapted species in gaps. Main conclusions For a given canopy closure, our results show that thermophilization of understorey communities is higher in areas with previous disturbances than in undisturbed forests. By increasing the speed of thermophilization, the disturbance regime plays a key role in the adaptation of forest communities to climate warming. The effects of large-scale disturbances on forest plant composition should therefore not be overlooked, especially since disturbance regime tends to intensify with climate change.

ano.nymous@ccsd.cnrs.fr.invalid (Lucie Dietz) 13 May 2022

https://hal.inrae.fr/hal-03037468v1

[hal-03040751] New developments in understanding plant water transport under drought stress

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ano.nymous@ccsd.cnrs.fr.invalid (Amanda A Cardoso) 04 Dec 2020

https://hal.inrae.fr/hal-03040751v1

[hal-03040738] Towards a set of national forest inventory indicators to be used for assessing the conservation status of the habitats directive forest habitat types

Since the enactment of the EU Habitats Directive, the conservation status of forest habitat types, habitats of species, and species has become the central concept of the Directive's nature conservation legislation. Despite its role, it has drawn relatively little attention. Within a rather short research period, a few research papers have addressed the existing definitions, indicators for the conservation status assessment, and assessment techniques. This paper attempted to complete the set of measurable indicators available in national forest inventories and connect them with the forest habitat types’ conservation status components (area, function, structure, and prospects). A set of 40 indicators was defined, labelled with one or more of the four conservation status components and assessed with the quality dimensions. The analysis uncovered that five indicators could be used to assess the component of range and area, 20 that of structure, 22 that of function and 27 that of prospects. It also showed that conventional forestry indicators such as tree species, diameter at breast height, and regeneration are less sensitive regarding the data quality. Conversely, some typical biodiversity indicators lacked completeness, timeliness, and precision. In addition to this analysis, the data distributions (data for them were provided by the national forest inventories of Italy, Slovenia, and Spain) of some indicators were analysed. Based on all the results, it was also possible to conclude that there is a shortage of national forest inventory indicators for the assessments of the area and function conservation status components. While the area component should be described with the indicators of forest habitat type fragmentation, mingling and perforation with non-forest and other forest vegetation communities, the functional component is bereft of indicators describing processes such as biomass growth and carbon cycling. Future research should thus search for more indicators to represent all conservation status components in a more balanced way. More efforts should also be expended into the harmonisation of indicators.

ano.nymous@ccsd.cnrs.fr.invalid (Marko Kovac) 04 Dec 2020

https://hal.inrae.fr/hal-03040738v1

[hal-03206438] Comparing observer performance in vegetation records by efficiency graphs derived from rarefaction curves

Species richness is a key variable in measuring diversity of ecological communities. It is crucial to get reliable estimates for the number of plant species in space (mapping) and - even more important in the context of monitoring - over time. Therefore, knowledge on error rates related to recordings of species numbers should be considered in such inventories. The performance of observers in four field tests to capture species numbers carried out in forest ecosystems in central and southern Europe were compared. Observer-related species accumulation (rarefaction) curves and derived efficiency curves were analysed, resulting in mean error rates of 29.7% and 39.4% over series of plots sized 4m(2) and 100m(2) respectively. As a new approach individual rarefaction and efficiency curves reveal site-specific and spatially differentiated capabilities of observers to register plant species. Since expertise and individual searching strategies are difficult to parametrise, reasons for variation in error rates remain largely unknown. However, statistical modelling with site- and scale-specific mean error rates gave an overview on important influential factors like location, scale, spatial integration, and their interactions. Our results underline the importance to incorporate specific training and inter-comparison measures in monitoring programs and critical perception of results on temporal changes of species richness.

ano.nymous@ccsd.cnrs.fr.invalid (Walter Seidling) 23 Apr 2021

https://hal.inrae.fr/hal-03206438v1

[hal-02527995] Distribution of soil properties along forest-grassland interfaces: Influence of permanent environmental factors or land-use after-effects?

Soil properties vary spatially according to land use; both because land users have selected specific soil properties for specific land uses, and land uses modify the soil properties. However, permanent environment factors and land-use effects are unlikely to display the exact same spatial patterns. Study of the spatial and historical patterns of distribution of soil properties could help to separate between these two causes. In this aim, we studied 22 forest-grassland interfaces with controlled historical configurations in northeast France. In each land use (forest and grassland), three distances to the edge (edge, periphery and core) and two land-use histories (ancient and recent) were studied.Along forest-grassland interfaces, forests were usually located slightly upslope of grasslands, and mainly because this non-random topographic position the topsoil texture was significantly more silty in forests, and clayey in grasslands. After statistically controlling for the effects of topography and soil texture, we observed two main gradients of variation in soil properties according to the distance-to-edge (acidity in forest and nutrient content in grassland). In forest, pH and Ca dropped from the edges to the peripheries (15 m distance), while in grassland, C, N, P and Na sharply increased from the edges to the cores (25 m distance). These results demonstrate, through the edge effect, the strong influence of the land use on a part of soil properties. Furthermore, less than two centuries after grassland afforestation or deforestation, we observed that soil properties in recent forests and recent grasslands were respectively closer to their current land use than to their former land use. These results demonstrate a rapid change in soil properties after land-use change. However, recent forests and recent grasslands kept a legacy of soil texture from their former land use, respectively. Recent grasslands also kept a lower soil density, N and Na content compared to ancient grasslands.Hence, this study of forest-grassland interfaces show strong and short-scale relationships between land use and soil properties and suggest that they express both original choices of land users for specific soil properties and land-use after-effects. The non-random topographic position of the forest-grassland interfaces indicates a conscious choice of this positioning by the land users, for agronomic reasons. Beyond that, land use, through vegetation composition and management practices, also has a strong impact on soil properties. The fact that land-use changes affect most soil properties after only a few decades confirms the existence of land-use effects over time.

ano.nymous@ccsd.cnrs.fr.invalid (Maxime Burst) 21 Dec 2021

https://hal.inrae.fr/hal-02527995v1

[hal-02549007] Limiting factors of aspen radial growth along a climatic and soil water budget gradient in south-western Siberia

Understanding how climate and soil hydrology control tree growth is critical to predict the response of Siberian ecosystems to climate change. The general aim of this study was to (i) characterize the soil water budget and identify the factors controlling aspen (Populus tremula L.) radial growth in south-western Siberia, and (ii) assess its potential response to future climate change. Along a gradient of climate and soil hydrological conditions, soil water budgets were reconstructed by modeling at four sites, and dendrochronological analyses were performed. Aspen growth potential was simulated in response to different climate change scenarios represented by shifts in soil water budgets. Simulated soil water budgets varied with climate variables, specifically increased temperature and drier summer combined with varying winter precipitation occurring as snowfall.. We show that plant-available soil water and drainage gradually increased while stress decreased from the warmest and driest (south, forest-steppe zone) site to the coldest and wettest (north, southern taiga zone) site. Aspen radial growth was mainly limited by summer temperature in the north and by summer water deficit in the south. Surprisingly, we did not find clear evidence of snow level impact on radial growth, either positively in the south (water supply and protection against soil freezing) or negatively in the north (water-logging and drainage). In the context of climate change, water stress intensity could increase dramatically in the south inhibiting aspen growth; in those places summer soil water content depends on the refilling that occurs at snow-melt and increasing winter precipitation could alleviate stress levels. Conversely, in the north, aspen growth may mostly benefit from rising temperature.

ano.nymous@ccsd.cnrs.fr.invalid (Félix Bredoire) 21 Apr 2020

https://hal.inrae.fr/hal-02549007v1

[hal-03038558] Dernières innovations sur la plantation forestière. Contribution de la R&D pour accompagner les évolutions attendues dans les pratiques

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ano.nymous@ccsd.cnrs.fr.invalid (Catherine C. Collet) 03 Dec 2020

https://hal.inrae.fr/hal-03038558v1

[hal-02949021] Impacts of a partial rainfall exclusion in the field on growth and transpiration: consequences for leaf-level and whole-plant water-use efficiency compared to controlled conditions

• Water use efficiency (WUE), oftentimes estimated as transpiration efficiency (TE): the amount of biomass produced with regard to the water used, has not yet been used as a breeding trait to select poplar genotypes with simultaneously high productivity and conservation of water. Before its application as a selection target, evidence must be presented showing that WUE or its estimators remain constant with age and across environmental conditions. • We conducted a rainfall exclusion experiment in the field on two Populus euramericana (Moench.) and two Populus nigra (L.) genotypes, and assessed leaf-level (A/g s) and whole-plant WUE (DMT/WU as well as their components and related traits. Then, we aimed to compare these results with the same poplar genotypes grown in a glasshouse under contrasting water availability. • Despite a reduction of soil water content and whole-plant transpiration, growth was stimulated in the rainfall exclusion plot, likely as a result of an increased nitrogen assimilation. However, TE values between the glasshouse and the field were similar, and genotype ranking remained fairly constant for transpiration, carbon isotopic discrimination (∆, as a proxy for Wi) and TE. Moreover, even though the drivers of WUE in both experiments were different, increases of WUE measured as ∆ or TE was not associated with lower biomass production. Relatively good agreement was found between ∆ and TE in the field, absence of a similar correlation in the glasshouse is discussed. • These results suggest that ∆ may be a good proxy for TE, and could be used, both as a breeding target for genotype selection in glasshouses without impacting biomass production when planted in the field. However, reduced water availability modified the genotype ranking more significantly than between the field/glasshouse experiments, suggesting a diversity of poplar response to drought that should be considered in breeding strategies. ABBREVIATIONS WUE water use efficiency Wi leaf intrinsic water use efficiency measured by leaf gas exchange (A/g s) TE whole-plant transpiration efficiency (biomass production over water used, DM T /WU) ∆ carbon isotope discrimination δ carbon isotope composition A net CO 2 assimilation C i internal CO 2 concentration g s stomatal conductance to water vapor WU whole plant water use E daily whole-plant transpiration per unit area VPD vapor pressure deficit Vc max maximum CO 2 carboxylation rate J max maximum photosynthetic electron flux A max net CO 2 assimilation measured under saturating atmospheric CO 2 concentration SWC soil water content Ψ p predawn leaf water potential H tree height https://doi.

ano.nymous@ccsd.cnrs.fr.invalid (Maxime Durand) 21 Jul 2022

https://hal.inrae.fr/hal-02949021v1

[hal-03273202] Effet de la hauteur de prélèvement sur la composition quantitative et qualitative des polyphénols de l’écorce d’Abies alba Mill.

L’écorce de résineux, cultivés dans un but commercial, est une source potentielle précieuse de métabolites secondaires tels que les polyphénols. Les tannins, qui font partie des polyphénols présents dans l’écorce, sont utilisés dans la fabrication d’adhésifs et de résines, mais également en tant qu’agent de tannage, antibactérien, antifongique, antitermite et antioxydant. Peu d’informations existent à propos du rendement et de la composition des extraits d’écorce en fonction de la hauteur de l’échantillon prélevé dans le tronc ainsi qu’en fonction de la présence ou l’absence de branches. Cette étude a pour but d’examiner la variabilité des métabolites secondaires présents dans l’écorce d’Abies alba à la fois en fonction de la hauteur de l’échantillon prélevé dans un arbre, mais également la variabilité présente à des hauteurs spécifiques entre plusieurs arbres. La finalité de cette étude est de déterminer quelle fraction d’écorce contient le plus d’extractibles chez cette essence. Pour cela, huit arbres ont été sélectionnés dans lesquels un maximum de treize disques a été coupé tout le long du tronc. Ces échantillons ont été prélevés en bas du tronc à une hauteur de 30 cm du sol puis à différentes hauteurs Ces différentes hauteurs ont été choisies pour des raisons industrielles (hauteur limite pour le bois d’œuvre ou pour l’utilisation industrielle) mais également pour des raisons physiologiques (hauteur à la base du houppier, hauteur de la première branche verte…). Les échantillons prélevés ont été broyés puis extraits avec un mélange eau/éthanol (1 :1, v/v) en réalisant une extraction accélérée à chaud et sous pression. Une première étude quantitative est réalisée pour connaître la quantité d’extractibles totale présente dans l’écorce. La seconde étude est qualitative, afin de connaître quels types d’extractibles sont présents dans ces écorces. Ces extraits ont donc été examinés par chromatographie liquide couplée à un spectromètre UV-visible et un spectromètre de masse .Les résultats ont montré que la composition de l’extrait total d’écorce augmente en même temps que la hauteur dans le tronc. La proportion la plus élevée en composés polyphénoliques se trouve dans la section inférieure sous la couronne.

ano.nymous@ccsd.cnrs.fr.invalid (Pauline Gérardin) 29 Jun 2021

https://agroparistech.hal.science/hal-03273202v1

[hal-02978675] Perspectives d'émergence d'une filière forêt-chimie des extractibles Points de vue des acteurs du Nord-Est de la France et du Sud-Ouest de l'Allemagne

La biomasse forestière peut être une source de molécules d’intérêt dans le but de substituer ou de compléter les molécules pétro-sourcées. Par conséquent, une valorisation innovante des extractibles du bois semble être une opportunité économique, sociale et environnementale. L’objectif de notre étude est de mieux cerner les perspectives d’émergence d’une nouvelle valorisation chimique des connexes bois pour la région Grand Est, à partir des avis et ressentis des acteurs de la filière forêt-bois et de la valorisation chimique de cette région ainsi que de territoires voisins. Nos résultats se portent sur trois axes : les stratégies de valorisation des connexes des entreprises de la filière forêt-bois, les perceptions des acteurs sur l’émergence d’une filière forêt-chimie, et les perspectives de mise en place d’une telle filière à moyen terme. Nous conviendrons tout de même que les résultats doivent être approfondis dans le cadre de perspectives de recherche pour préciser les conditions de la mise en œuvre de cette filière.

ano.nymous@ccsd.cnrs.fr.invalid (Frédéric Bonin) 26 Oct 2020

https://agroparistech.hal.science/hal-02978675v1

[hal-02985820] Improving aboveground biomass estimates by taking into account density variations between tree components

• Key message : Strong density differences were observed between stem wood at 1.30 m and other tree components (stem wood, stem bark, knots, branch stumps and branches). The difference, up to 40% depending on the component, should be taken into account when estimating the biomass available for industrial uses, mainly fuelwood and wood for chemistry.• Context : Basic density is a major variable in the calculation of tree biomass. However, it is usually measured on stem wood only and at breast height.• Aims : The objectives of this study were to compare basic density of stem wood at 1.30 m with other tree components and assess the impact of differences on biomass.• Methods : Three softwood species were studied: Abies alba Mill., Picea abies (L.) H. Karst., Pseudotsuga menziesii (Mirb.) Franco. X-Ray computed tomography was used to measure density.• Results : Large differences were observed between components. Basic density of components was little influenced by tree size and stand density. Overall, bark, knot and branch biomasses were highly underestimated by using basic density measured at 1.30 m.• Conclusion : Using available wood density databases mainly based on breast height measurements would lead to important biases (up to more than 40%) on biomass estimates for some tree components. Further work is necessary to complete available databases.

ano.nymous@ccsd.cnrs.fr.invalid (Antoine Billard) 01 Nov 2021

https://hal.science/hal-02985820v1

[hal-02933179] Yield and compositions of bark phenolic extractives from three commercially significant softwoods show intra- and inter-specific variation

Tree bark is rich in commercially valuable secondary metabolites such as polyphenolic compounds like flavonoids and tannins. The yield and composition of bark extractives from Abies alba varies longitudinally within the stem. A. alba bark above the crown had the greatest extractive content, but the concentration of polyphenolic compounds was greatest below the crown. Here, we use a nonlinear model describing how bark extractive yields of A. alba, Picea abies and Pseudotsuga menziesii change with height, where differences among species are accounted for using different model coefficients. For all species there is longitudinal variability in extract yield. For P. abies and P. menziesii, the form of that variation differs depending on whether the bark was located at the same position in the stem as branches. Although the relationship form of total extractive yield differs between branched and un-branched samples, the relationship forms for individual compound yields does not change depending on branch presence. Despite trees from thinned stands having longer crowns and faster growth rates, indicative of greater photosynthetic activity, there was no evidence that thinning had affected either the yield or composition of extractives in these species. In P. abies, the proportions of flavonoids was higher in bark from the top of the tree, whereas epi-gallocatechin gallate was found in high proportions at the stem base. In P. menziesii bark extracts, taxifolin was the dominant compound, present in significantly higher proportions in bark towards the base of the stem.

ano.nymous@ccsd.cnrs.fr.invalid (Maree Brennan) 22 Aug 2022

https://hal.univ-lorraine.fr/hal-02933179v1

[hal-03038406] How does oak mast seeding affect the feeding behavior of sympatric red and roe deer?

Oak reproduction is characterized by mast seeding with high inter-annual fluctuations in fruit production. Such resource pulses can greatly affect ecosystem functioning and may cause seed consumers to alter their mobility, demography, or diet. Consequences of mast seeding for seed consumers remain poorly understood as their long timescale makes them difficult to study. We investigated impacts of oak mast seeding on the feeding behavior of two sympatric European deer species: red deer (Cervus elaphus) and roe deer (Capreolus capreolus). We analyzed their rumen content over a 31-year period in tandem with 10 years of data on oak fructification (i.e. 8 years of field monitoring and two modelled years). Acorn production is strongly correlated with consumption by both deer species. In years of high fructification, acorns represent more than 50% and 35% of red and roe deer diet, respectively, confirming assumptions that deer favor acorns when these are available. Red deer eat more acorns than roe deer both between and within years. High acorn production in mast years appears to saturate the capacity of deer to consume acorns. As the proportion of acorns increase in their diet, red deer eat more grasses and less conifer browse. No dietary shift was found for roe deer. By inducing dietary shifts in consumers, oak mast seeding can have cascading effects on ecosystem processes, notably on the damages on conifers caused by red deer and the consequences for forest dynamics.

ano.nymous@ccsd.cnrs.fr.invalid (Julien Barrere) 22 Aug 2022

https://hal.inrae.fr/hal-03038406v1

[hal-02957456] Non-stomatal processes reduce gross primary productivity in temperate forest ecosystems during severe edaphic drought

Severe drought events are known to cause important reductions of gross primary productivity (GPP) in forest ecosystems. However, it is still unclear whether this reduction originates from stomatal closure (Stomatal Origin Limitation) and/or non-stomatal limitations (Non-SOL). In this study, we investigated the impact of edaphic drought in 2018 onGPPand its origin (SOL, NSOL) using a dataset of 10 European forest ecosystem flux towers. In all stations whereGPPreductions were observed during the drought, these were largely explained by declines in the maximum apparent canopy scale carboxylation rateV(CMAX,APP)(NSOL) when the soil relative extractable water content dropped below around 0.4. Concurrently, we found that the stomatal slope parameter (G(1), related to SOL) of the Medlynet al. unified optimization model linking vegetation conductance andGPPremained relatively constant. These results strengthen the increasing evidence that NSOL should be included in stomatal conductance/photosynthesis models to faithfully simulate bothGPPand water fluxes in forest ecosystems during severe drought. This article is part of the theme issue 'Impacts of the 2018 severe drought and heatwave in Europe: from site to continental scale'.

ano.nymous@ccsd.cnrs.fr.invalid (Louis Gourlez de La Motte) 05 Oct 2020

https://hal.inrae.fr/hal-02957456v1

[hal-02610238] Stand growth and structure of mixed-species and monospecific stands of Scots pine (Pinus sylvestris L.) and oak (Q. robur L., Quercus petraea (Matt.) Liebl.) analysed along a productivity gradient through Europe

Past failures of monocultures, caused by wind-throw or insect damages, and ongoing climate change currently strongly stimulate research into mixed-species stands. So far, the focus has mainly been on combinations of species with obvious complementary functional traits. However, for any generalization, a broad overview of the mixing reactions of functionally different tree species in different mixing proportions, patterns and under different site conditions is needed, including assemblages of species with rather similar demands on resources such as light. Here, we studied the growth of Scots pine and oak in mixed versus monospecific stands on 36 triplets located along a productivity gradient across Europe, reaching from Sweden to Spain and from France to Georgia. The set-up represents a wide variation in precipitation (456-1250 mm year-1), mean annual temperature (6.7-11.5 °C) and drought index by de Martonne (21-63 mm °C-1). Stand inventories and increment cores of trees stemming from 40- to 132-year-old, fully stocked stands on 0.04-0.94-ha-sized plots provided insight into how species mixing modifies stand growth and structure compared with neighbouring monospecific stands. On average, the standing stem volume was 436 and 360 m3 ha-1 in the monocultures of Scots pine and oak, respectively, and 418 m3 ha-1 in the mixed stands. The corresponding periodical annual volume increment amounted to 10.5 and 9.1 m3 ha-1 year-1 in the monocultures and 10.5 m3 ha-1 year-1 in the mixed stands. Scots pine showed a 10% larger quadratic mean diameter (p is smaller than 0.05), a 7% larger dominant diameter (p is smaller than 0.01) and a 9% higher growth of basal area and volume in mixed stands compared with neighbouring monocultures. For Scots pine, the productivity advantages of growing in mixture increased with site index (p is smaller than 0.01) and water supply (p is smaller than 0.01), while for oak they decreased with site index (p is smaller than 0.01). In total, the superior productivity of mixed stands compared to monocultures increased with water supply (p is smaller than 0.10). Based on 7843 measured crowns, we found that in mixture both species, but especially oak, had significantly wider crowns (p is smaller than 0.001) than in monocultures. On average, we found relatively small effects of species mixing on stand growth and structure. Scots pine benefiting on rich, and oak on poor sites, allows for a mixture that is productive and most likely climate resistant all along a wide ecological gradient. We discuss the potential of this mixture in view of climate change.

ano.nymous@ccsd.cnrs.fr.invalid (Hans Pretzsch) 16 May 2020

https://hal.inrae.fr/hal-02610238v1

[hal-03006193] The pantropical response of soil moisture to El Niño

The 2015-2016 El Nino event ranks as one of the most severe on record in terms of the magnitude and extent of sea surface temperature (SST) anomalies generated in the tropical Pacific Ocean. Corresponding global impacts on the climate were expected to rival, or even surpass, those of the 1997-1998 severe El Nino event, which had SST anomalies that were similar in size. However, the 2015-2016 event failed to meet expectations for hydrologic change in many areas, including those expected to receive well above normal precipitation. To better understand how climate anomalies during an El Nino event impact soil moisture, we investigate changes in soil moisture in the humid tropics (between +/- 25 degrees) during the three most recent super El Nino events of 1982-1983,1997-1998 and 2015-2016, using data from the Global Land Data Assimilation System (GLDAS). First, we use in situ soil moisture observations obtained from 16 sites across five continents to validate and bias-correct estimates from GLDAS (r(2) = 0.54). Next, we apply a k-means cluster analysis to the soil moisture estimates during the El Nino mature phase, resulting in four groups of clustered data. The strongest and most consistent decreases in soil moisture occur in the Amazon basin and maritime southeastern Asia, while the most consistent increases occur over eastern Africa. In addition, we compare changes in soil moisture to both precipitation and evapotranspiration, which showed a lack of agreement in the direction of change between these variables and soil moisture most prominently in the southern Amazon basin, the Sahel and mainland southeastern Asia. Our results can be used to improve estimates of spatiotemporal differences in El Nino impacts on soil moisture in tropical hydrology and ecosystem models at multiple scales.

ano.nymous@ccsd.cnrs.fr.invalid (Kurt C Solander) 15 Nov 2020

https://hal.inrae.fr/hal-03006193v1

[hal-02610246] Species mixing reduces drought susceptibility of Scots pine (Pinus sylvestris L.) and oak (Quercus robur L., Quercus petraea (Matt.) Liebl.) - Site water supply and fertility modify the mixing effect

Tree species mixing has been widely promoted as a promising silvicultural tool for reducing drought stress. However, so far only a limited number of species combinations have been studied in detail, revealing inconsistent results. In this study, we analysed the effect of mixing Scots pine and oak (pedunculate oak and sessile oak) trees on their drought response along a comprehensive ecological gradient across Europe. The objective was to improve our knowledge of general drought response patterns of two fundamental European tree species in mixed versus monospecific stands. We focused on three null hypotheses: (HI) tree drought response does not differ between Scots pine and oak, (HII) tree drought response of Scots pine and oak is not affected by stand composition (mixture versus monoculture) and (HIII) tree drought response of Scots pine and oak in mixtures and monocultures is not modified by tree size or site conditions. To test the hypotheses, we analysed increment cores of Scots pine and oak, sampled in mixed and monospecific stands, covering a wide range of site conditions. We investigated resistance (the ability to maintain growth levels during drought), recovery (the ability to restore a level of growth after drought) and resilience (the capacity to recover to pre-drought growth levels), involving sitespecific drought events that occurred between 1976 and 2015. In monocultures, oak showed a higher resistance and resilience than Scots pine, while recovery was lower. Scots pine in mixed stands exhibited a higher resistance, but also a lower recovery compared with Scots pine in monocultures. Mixing increased the resistance and resilience of oak. Ecological factors such as tree size, site water supply and site fertility were found to have significant effects on the drought response. In the case of Scots pine, resistance was increased by tree size, while recovery was lowered. Resistance of oak increased with site water supply. The observed mixing effect on the tree drought response of Scots pine and oak was in some cases modified by the site conditions studied. Positive mixing effects in terms of resistance and resilience of oak increased with site water supply, while the opposite was found regarding recovery. In contrast, site fertility lessened the positive mixing effect on the resistance of Scots pine. We hypothesise that the observed positive mixing effects under drought mainly result from waterand/or light-related species interactions that improve resource availability and uptake according to temporal and spatial variations in environmental conditions.

ano.nymous@ccsd.cnrs.fr.invalid (M. Steckel) 16 May 2020

https://hal.inrae.fr/hal-02610246v1

[hal-02948750] Validation of Space-based albedo products from upscaled tower-based measurements over Heterogeneous and Homogeneous landscapes

Surface albedo is a fundamental radiative parameter as it controls the Earth’s energy budget and directly affects the Earth’s climate. Satellite observations have long been used to capture the temporal and spatial variations of surface albedo because of their continuous global coverage. However, space-based albedo products are often affected by errors in the atmospheric correction, multi-angular bi-directional reflectance distribution function (BRDF) modelling, as well as spectral conversions. To validate space-based albedo products, an in situ tower albedometer is often used to provide continuous “ground truth” measurements of surface albedo over an extended area. Since space-based albedo and tower-measured albedo are produced at different spatial scales, they can be directly compared only for specific homogeneous land surfaces. However, most land surfaces are inherently heterogeneous with surface properties that vary over a wide range of spatial scales. In this work, tower-measured albedo products, including both directional hemispherical reflectance (DHR) and bi-hemispherical reflectance (BHR), are upscaled to coarse satellite spatial resolutions using a new method. This strategy uses high-resolution satellite derived surface albedos to fill the gaps between the albedometer’s field-of-view (FoV) and coarse satellite scales. The high-resolution surface albedo is generated from a combination of surface reflectance retrieved from high-resolution Earth Observation (HR-EO) data and moderate resolution imaging spectroradiometer (MODIS) BRDF climatology over a larger area. We implemented a recently developed atmospheric correction method, the Sensor Invariant Atmospheric Correction (SIAC), to retrieve surface reflectance from HR-EO (e.g., Sentinel-2 and Landsat-8) top-of-atmosphere (TOA) reflectance measurements. This SIAC processing provides an estimated uncertainty for the retrieved surface spectral reflectance at the HR-EO pixel level and shows excellent agreement with the standard Landsat 8 Surface Reflectance Code (LaSRC) in retrieving Landsat-8 surface reflectance. Atmospheric correction of Sentinel-2 data is vastly improved by SIAC when compared against the use of in situ AErosol RObotic NETwork (AERONET) data. Based on this, we can trace the uncertainty of tower-measured albedo during its propagation through high-resolution EO measurements up to coarse satellite scales. These upscaled albedo products can then be compared with space-based albedo products over heterogeneous land surfaces. In this study, both tower-measured albedo and upscaled albedo products are examined at Ground Based Observation for Validation (GbOV) stations (https://land.copernicus.eu/global/gbov/), and used to compare with satellite observations, including Copernicus Global Land Service (CGLS) based on ProbaV and VEGETATION 2 data, MODIS and multi-angle imaging spectroradiometer (MISR).

ano.nymous@ccsd.cnrs.fr.invalid (Rui Song) 25 Oct 2023

https://hal.inrae.fr/hal-02948750v1

[hal-03029648] Diversity and potentiality of multi-criteria decision analysis methods for agri-food research

AbstractThere is a growing demand for moving towards sustainable agri-food systems which per nature covers a complex network of activities and domains; such systems will benefit from multi-criteria decision analysis (MCDA) methods. Although some reviews on MCDA in agri-food research have been published, none of them covered the whole value chain. In this article, a corpus of 954 articles published by INRA scientists from 2007 to 2017 was used to study the diversity and potentiality of MCDA techniques. For the first time, experts from more than 10 agri-food domains worked altogether to annotate the articles, carry out a multivariate analysis, and finally interpret the statistical results to identify the specificities of certain domains and the complementarities between domains and to suggest avenues for future agri-food research. One-third of the studies were based only on a list of indicators, even when their purpose was to choose, sort, or rank options. Regardless of the scientific discipline in the agri-food sector, MCDA studies rarely considered temporal dynamics, spatial scale changes, or stakeholder contributions. As the agri-food system becomes increasingly sustainable in the near future, the use of MCDA methods will accelerate. To become more effective, they will have to include ecosystem services, even outside the scope of ecological studies. Similarly, MCDA studies will need to include participatory science to involve stakeholders (i.e., public authorities, governmental agencies) and end-users (i.e., farmers, producers, industrials, consumers) in the construction of the multi-criteria evaluation but also in the resulting decisions.

ano.nymous@ccsd.cnrs.fr.invalid (Geneviève Gésan-Guiziou) 22 Nov 2021

https://hal.inrae.fr/hal-03029648v1

[hal-02942642] Sensitivity of gross primary productivity to climatic drivers during the summer drought of 2018 in Europe

In summer 2018, Europe experienced a record drought, but it remains unknown how the drought affected ecosystem carbon dynamics. Using observations from 34 eddy covariance sites in different biomes across Europe, we studied the sensitivity of gross primary productivity (GPP) to environmental drivers during the summer drought of 2018 versus the reference summer of 2016. We found a greater drought-induced decline of summer GPP in grass- lands (−38%) than in forests (−10%), which coincided with reduced evapotranspiration and soil water content (SWC). As com- pared to the ‘normal year’ of 2016, GPP in different ecosystems exhibited more negative sensitivity to summer air temperature (Ta) but stronger positive sensitivity to SWC during summer drought in 2018, that is, a stronger reduction of GPP with soil moisture deficit. We found larger negative effects of Ta and vapour pressure deficit (VPD) but a lower positive effect of photosynthetic photon flux density on GPP in 2018 compared to 2016, which contributed to reduced summer GPP in 2018. Our results demonstrate that high temperature-induced increases in VPD and decreases in SWC aggravated drought impacts on GPP.

ano.nymous@ccsd.cnrs.fr.invalid (Zheng Fu) 18 Sep 2020

https://hal.inrae.fr/hal-02942642v1

[hal-03014264] Snow cover duration trends observed at sites and predicted by multiple models

Abstract. Thirty-year simulations of seasonal snow cover in 22 physically based models driven with bias-corrected meteorological reanalyses are examined at four sites with long records of snow observations. Annual snow cover durations differ widely between models but interannual variations are strongly correlated because of the common driving data. No significant trends are observed in starting dates for seasonal snow cover, but there are significant trends towards snow cover ending earlier at two of the sites in observations and most of the models. A simplified model with just two parameters controlling solar radiation and sensible heat contributions to snowmelt spans the ranges of snow cover durations and trends. This model predicts that sites where snow persists beyond annual peaks in solar radiation and air temperature will experience rapid decreases in snow cover duration with warming as snow begins to melt earlier and at times of year with more energy available for melting.

ano.nymous@ccsd.cnrs.fr.invalid (Richard Essery) 05 Jan 2021

https://hal.science/hal-03014264v2

[hal-02948752] Lack of effect of admixture proportion and tree density on water acquisition depth for European beech (Fagus sylvatica L.) and sycamore maple (Acer pseudoplatanus L.)

AbstractKey messageIn a mixed,Fagus sylvaticaL.-Acer pseudoplatanusL., young plantation, trees of both species absorbed water from superficial soil layers despite the presence of roots and water in deeper layers. Admixture proportion and tree density were weak predictors of water acquisition depth, as well as fine root vertical distribution, although it might be due to distinct periods of root and isotope investigations.ContextPromoting mixed forests and reducing stand densities have been proposed as effective ways to maintain the productivity of temperate planted forest stands in a changing climate.AimsThe objective of this study was to analyse how stand density and the degree of admixture of European beech and sycamore maple interactively influenced the water acquisition profile of individual trees.MethodsWe used a stable isotope (deuterium) approach to determine the profiles of soil water acquisition of both species in a 16-year-old plantation where trees had been planted along crossed gradients of tree density and species proportion. The profiles were then compared with the vertical distribution of fine root of these species in the plantation.ResultsAll the target trees mostly absorbed soil water from the first few centimetres of soil despite homogenous vertical water availability and the fact that a great part of the fine root biomass was located below 10 cm. Admixture proportion and tree density had negligible effects on soil water acquisition depth.ConclusionNo vertical differentiation of soil water acquisition between the two species was observed, suggesting that mixing these species does not promote reduction of belowground competition for resource acquisition. The vertical distribution of fine root may be a weak predictor of water acquisition depth.

ano.nymous@ccsd.cnrs.fr.invalid (Alexandre Fruleux) 05 Apr 2021

https://hal.inrae.fr/hal-02948752v1

[hal-02534416] Selecting for water use efficiency, wood chemical traits and biomass with genomic selection in a Eucalyptus breeding program

The selection of ideotypes combining high biomass production, high water use efficiency (WUE) and adequate wood properties is a major challenge in improving forest trees for industrial plantations. This issue was addressed in a field experiment evaluating 1130 clones of Eucalyptus urophylla * Eucalyptus grandis. Genomic selection using 3303 SNPs and the GBLUP model was carried out at age 55 months to select genitors and clones for stem volume (V55), WUE (using stable carbon isotope composition in stemwood, δ13C as a proxy, transformed into intrinsic WUE, Wi), as well as lignin (KL) and holocellulose (HCEL) contents. The variance components were mainly additive for δ13C(Wi), KL and HCEL, while they were highly non-additive for V55 (the ratio of dominance to additive variance was 130%). The narrow sense heritability was higher for Wi (h2 = 0.704) than for volume and wood traits (<0.5), showing that this trait was under strong genetic control. Additive and total genetic correlations among traits were low (between −0.260 and 0.260) as were the correlations due to environmental effects (between −0.267 and 0.344), which suggests a rather independence among traits. The equal emphasis and the desired gain index selection methods were used to assess economic weights and to estimate the expected additive and total genetic gains. Different breeding objectives were defined with percentages weighting the economic coefficients or the desired gain for the equal emphasis or desired gain method, respectively. When the breeding objective gave emphasis to volume production using the percentages of 70%, 10%, 10%, and 10% for V55, HCEL, KL and Wi, respectively, positive gains were observed in both methods, but the correlation between index rankings were 0.686 and 0.635 for breeding and clonal selection, respectively. With a more balanced breeding objective using percentages such as 25%, 25%, 25%, 25% for V55, HCEL, KL and Wi, respectively, both index methods gave close positive gains and similar rankings, the correlation between index rankings ranging from 0.941 to 0.982 for parent selection and from 0.883 to 0.903 for clone selection. With more contrasted percentages between V55 and Wi, such as (80%, 10%, 10%, 0%) or (90%, 10%, 10%, −10%), the gain increased for V55 and was close to the maximum and decreased markedly for Wi. This study explores the magnitude of economic coefficients for index selection and shows that positive genetic gains can be achieved by associating biomass, a proxy of WUE and wood chemical traits. It provides encouraging results for selecting Eucalyptus varieties adapted to dry zones while maintaining good performances regarding other economic traits.

ano.nymous@ccsd.cnrs.fr.invalid (Jean-Marc Bouvet) 22 Aug 2022

https://hal.inrae.fr/hal-02534416v1

[hal-02938719] In situ 13CO2 labelling of rubber trees reveals a seasonal shift in the contribution of the carbon sources involved in latex regeneration

Rubber trees (Hevea brasiliensis) are the main source of natural rubber, extracted from latex, which exudes from the trunk after tapping. Tapped trees require large amounts of carbon (C) to regenerate the latex after its collection. Knowing the contribution of C sources involved in latex biosynthesis will help in understanding how rubber trees face this additional C demand. Whole crown 13CO2 pulse labelling was performed on 4-year-old rubber trees in June, when latex production was low, and in October, when it was high. 13C content was quantified in the foliage, phloem sap, wood, and latex. In both labelling periods, 13C was recovered in latex just after labelling, indicating that part of the carbohydrate was directly allocated to latex. However, significant amounts of 13C were still recovered in latex after 100 d and the peak was reached significantly later than in phloem sap, demonstrating the contribution of a reserve pool as a source of latex C. The contribution of new photosynthates to latex regeneration was faster and higher when latex metabolism was well established, in October, than in June. An improved understanding of C dynamics and the source–sink relationship in rubber tree is crucial to adapt tapping system practices and ensure sustainable latex production.

ano.nymous@ccsd.cnrs.fr.invalid (Ornuma Duangngam) 15 Sep 2020

https://hal.science/hal-02938719v1

[hal-03179773] Temporal trends in tree defoliation and response to multiple biotic and abiotic stresses

The vitality of forests depends on multiple biotic and abiotic stresses that can act in an interactive way. Tree defoliation levels are therefore subject to long-term changes and shorter-term hazards that need to be monitored in the context of ongoing climate change. In this study, we analysed the combined effects of drought, insect attack and tree nutritional status on the level of defoliation in three major hardwood species in Europe: European beech (Fagus sylvatica), sessile oak (Quercus petraea) and pedunculate oak (Quercus robur). The forest condition data set was collected in the long-term intensive monitoring network in France (RENECOFOR). The average level of defoliation observed was 20% but varied considerably between plots and trees. From 1997 to 2015, beech defoliation worsened by 10% while oak defoliation stabilized over time. For the three tree species, crown defoliation was generally higher in the event of insect attack (increased by 2.6% to 7.5% depending on the tree species) and under drought (increased by 5.9%), while the effect of the tree nutritional statue was less consistent (from - 5.6% to + 10%) these factors acting synergistically. This study highlights the fact that the different stresses a tree species undergoes act in a complex and interactive way, with species-specific responses. In a context of increasing abiotic and biotic stresses, their combined analysis appears to be a necessity at a time when forest owners need to adapt their management to cope with climate change, particularly through the choice of tree species to be favoured in the future.

ano.nymous@ccsd.cnrs.fr.invalid (Maude Toïgo) 25 Aug 2022

https://hal.inrae.fr/hal-03179773v1

[hal-02948795] A portable, low-cost relaxed eddy accumulation (REA) system for quantifying ecosystem-level fluxes of volatile organics

Quantification of biogenic volatile organic compound (BVOC) fluxes into the atmosphere is crucial to understand their role in atmospheric oxidation and biogeochemical cycles. BVOC flux measurements were carried out in nine forest ecosystems using a relaxed eddy accumulation (REA) based sampling system, which is easily transportable, simple to operate and designed to be low-cost and therefore can easily be deployed at multiple remote locations. The REA measurements were carried out during daytime between 06:00 and 18:30 (Local Time) with a flux averaging period of 30 min. A detailed description of the REA sampling setup, operational procedure and validation by comparison with full eddy covariance (EC) BVOC flux measurements is provided. BVOC flux measurements from established long-term carbon and water flux tower sites in nine forest ecosystems are compared including Manitou Forest Observatory in Colorado, USA (pine woodland forest), Niwot Ridge AmeriFlux site in Colorado, USA (subalpine forest), Deer Canyon Preserve in New Mexico, USA (pinyon-juniper forest), Lei bamboo forest site near Taihuyuan, China, Qianyanzhou ChinaFLUX site in China (pine forest), Baskett Wildfire Refuge MOFlux site in Missouri, USA (deciduous oak forest), University of Michigan Biological Station PROPHET site in Michigan, USA (mixed deciduous forest), Changbai Mountain Forest Research Station in China (mixed deciduous forest) and the Guyaflux site (GF-Guy) in French Guiana (tropical rainforest). BVOC flux measurements using our REA setup confirm dominance of 2,3,2- methylbutenol (2,3,2-MBO) at the Manitou Forest Observatory and Niwot Ridge sites in Colorado. Monoterpene fluxes measured by REA showed good agreement (within ±10%) with monoterpene fluxes measured by PTR-MS at the Manitou Forest Observatory. The MOFlux site in Missouri was dominated by isoprene emissions (average flux of ~ 9.5 mg m−2 h−1) whereas the Deer Canyon site was dominated by α-pinene emissions (average flux ~ 0.73 mg m−2 h−1). Mixed deciduous forest sites at the PROPHET Station in Michigan and Changbai Mountain Forest Research Station in China primarily emitted isoprene along with some α-pinene, β-pinene and d-Limonene. Isoprene and α-pinene were the dominant BVOCs emitted from the subtropical Lei bamboo plantation at the Taihuyuan site in China while the pine forest site at Qianyanzhou in China were dominated by α-pinene emissions along with significant isoprene. BVOC measurements across different seasons (during 2009–2011) at a tropical forest site in French Guiana (Guyaflux site) revealed the dominance of isoprene emissions during all seasons. Irrespective of the type of the forest ecosystem, α-pinene was among the dominant monoterpenes emitted from all nine forests.

ano.nymous@ccsd.cnrs.fr.invalid (Chinmoy Sarkar) 31 Aug 2021

https://hal.inrae.fr/hal-02948795v1

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Productions 2020

HAL : Dernières publications

[hal-02434220] TRY plant trait database – enhanced coverage and open access

[hal-03051411] Energy, water and carbon exchanges in managed forest ecosystems: description, sensitivity analysis and evaluation of the INRAE GO+ model, version 3.0

[hal-02650649] Long-term thermal sensitivity of Earth’s tropical forests

[hal-03043585] Traits controlling shade tolerance in tropical montane trees

[hal-03207504] Altered energy partitioning across terrestrial ecosystems in the European drought year 2018

[hal-02948828] Microgeographic local adaptation and ecotype distributions: The role of selective processes on early life‐history traits in sympatric, ecologically divergent Symphonia populations

[hal-02948753] The global abundance of tree palms

[hal-02544285] La croissance des forêts et les changements environnementaux

[hal-03317972] Ancient forest statistics provide centennial perspective over the status and dynamics of forest area in France

[hal-02931277] A Machine-Learning Approach for Classifying Defects on Tree Trunks using Terrestrial LiDAR

[hal-03085655] Unprecedented pluri-decennial increase in the growing stock of French forests is persistent and dominated by private broadleaved forests

[hal-03778635] The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data

[hal-02995533] Ecosystem transpiration and evaporation: Insights from three water flux partitioning methods across FLUXNET sites

[hal-02541780] Carbon-nitrogen interactions in European forests and semi-natural vegetation - Part 1: Fluxes and budgets of carbon, nitrogen and greenhouse gases from ecosystem monitoring and modelling

[hal-02948747] Contrasting patterns of tree species mixture effects on wood δ13C along an environmental gradient

[hal-03040768] Water potential control of turgor‐driven tracheid enlargement in Scots pine at its xeric distribution edge

[hal-03273208] La crise des scolytes (Ips typographus) ravageurs de l’Épicéa commun (Picea abies) vue de l’intérieur Retours sur une enquête qualitative auprès d’acteurs du nord-est de la France et sa zone transfrontalière (Allemagne, Belgique) réalisée fin 2019 – début 2020

[hal-02934348] Sacrificing growth and maintaining a dynamic carbohydrate storage are key processes for promoting beech survival under prolonged drought conditions

[hal-03197983] Year-to-year crown condition poorly contributes to ring width variations of beech trees in French ICP level I network

[hal-03046910] Do tree rings record changes in soil fertility? Results from a Quercus petraea fertilization trial

[hal-03231138] Salt accumulation and effects within foliage of Tilia × vulgaris trees from the street greenery of Riga, Latvia

[hal-03209300] Reply to Elmendorf and Ettinger: Photoperiod plays a dominant and irreplaceable role in triggering secondary growth resumption

[hal-03209287] Photoperiod and temperature as dominant environmental drivers triggering secondary growth resumption in Northern Hemisphere conifers

[hal-02975249] Early effects of temperate agroforestry practices on soil organic matter and microbial enzyme activity

[hal-03037468] Windstorm‐induced canopy openings accelerate temperate forest adaptation to global warming

[hal-03040751] New developments in understanding plant water transport under drought stress

[hal-03040738] Towards a set of national forest inventory indicators to be used for assessing the conservation status of the habitats directive forest habitat types

[hal-03206438] Comparing observer performance in vegetation records by efficiency graphs derived from rarefaction curves

[hal-02527995] Distribution of soil properties along forest-grassland interfaces: Influence of permanent environmental factors or land-use after-effects?

[hal-02549007] Limiting factors of aspen radial growth along a climatic and soil water budget gradient in south-western Siberia

[hal-03038558] Dernières innovations sur la plantation forestière. Contribution de la R&D pour accompagner les évolutions attendues dans les pratiques

[hal-02949021] Impacts of a partial rainfall exclusion in the field on growth and transpiration: consequences for leaf-level and whole-plant water-use efficiency compared to controlled conditions

[hal-03273202] Effet de la hauteur de prélèvement sur la composition quantitative et qualitative des polyphénols de l’écorce d’Abies alba Mill.

[hal-02978675] Perspectives d'émergence d'une filière forêt-chimie des extractibles Points de vue des acteurs du Nord-Est de la France et du Sud-Ouest de l'Allemagne

[hal-02985820] Improving aboveground biomass estimates by taking into account density variations between tree components

[hal-02933179] Yield and compositions of bark phenolic extractives from three commercially significant softwoods show intra- and inter-specific variation

[hal-03038406] How does oak mast seeding affect the feeding behavior of sympatric red and roe deer?

[hal-02957456] Non-stomatal processes reduce gross primary productivity in temperate forest ecosystems during severe edaphic drought

[hal-02610238] Stand growth and structure of mixed-species and monospecific stands of Scots pine (Pinus sylvestris L.) and oak (Q. robur L., Quercus petraea (Matt.) Liebl.) analysed along a productivity gradient through Europe

[hal-03006193] The pantropical response of soil moisture to El Niño

[hal-02610246] Species mixing reduces drought susceptibility of Scots pine (Pinus sylvestris L.) and oak (Quercus robur L., Quercus petraea (Matt.) Liebl.) - Site water supply and fertility modify the mixing effect

[hal-02948750] Validation of Space-based albedo products from upscaled tower-based measurements over Heterogeneous and Homogeneous landscapes

[hal-03029648] Diversity and potentiality of multi-criteria decision analysis methods for agri-food research

[hal-02942642] Sensitivity of gross primary productivity to climatic drivers during the summer drought of 2018 in Europe

[hal-03014264] Snow cover duration trends observed at sites and predicted by multiple models

[hal-02948752] Lack of effect of admixture proportion and tree density on water acquisition depth for European beech (Fagus sylvatica L.) and sycamore maple (Acer pseudoplatanus L.)

[hal-02534416] Selecting for water use efficiency, wood chemical traits and biomass with genomic selection in a Eucalyptus breeding program

[hal-02938719] In situ 13CO2 labelling of rubber trees reveals a seasonal shift in the contribution of the carbon sources involved in latex regeneration

[hal-03179773] Temporal trends in tree defoliation and response to multiple biotic and abiotic stresses

[hal-02948795] A portable, low-cost relaxed eddy accumulation (REA) system for quantifying ecosystem-level fluxes of volatile organics

[hal-03231138] Salt accumulation and effects within foliage of Tilia × vulgaris trees from the street greenery of Riga, Latvia